| YIP3 | 
			YNL044W | 
			Protein localized to COPII vesicles, proposed to be involved in ER to Golgi tran... | 
			  | 
			16 | 
			43 | 
			  | 
			NAN | 
		
		
			| GYP6 | 
			YJL044C | 
			GTPase-activating protein (GAP) for the yeast Rab family member, Ypt6p; involved... | 
			GTPase activating protein (GAP)  for Ypt6 | 
			14 | 
			13 | 
			  | 
			0 | 
		
		
			| GDI1 | 
			YER136W | 
			GDP dissociation inhibitor, regulates vesicle traffic in secretory pathways by r... | 
			GDP dissociation inhibitor | 
			14 | 
			25 | 
			  | 
			0 | 
		
		
			| RGP1 | 
			YDR137W | 
			Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) that catalyzes nucleot... | 
			  | 
			13 | 
			10 | 
			-19.4150 | 
			0 | 
		
		
			| MDR1 | 
			YGR100W | 
			Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31... | 
			GTPase activating protein (GAP)  for Ypt6 | 
			12 | 
			13 | 
			  | 
			0 | 
		
		
			| VPS33 | 
			YLR396C | 
			ATP-binding protein that is a subunit of the homotypic vacuole fusion and vacuol... | 
			  | 
			11 | 
			35 | 
			  | 
			0 | 
		
		
			| VAM6 | 
			YDL077C | 
			Vacuolar protein that plays a critical role in the tethering steps of vacuolar m... | 
			  | 
			11 | 
			39 | 
			  | 
			0.0031 | 
		
		
			| ACO1 | 
			YLR304C | 
			Aconitase, required for the tricarboxylic acid (TCA) cycle and also independentl... | 
			aconitase | 
			9 | 
			28 | 
			  | 
			0 | 
		
		
			| RIC1 | 
			YLR039C | 
			Protein involved in retrograde transport to the cis-Golgi network; forms heterod... | 
			  | 
			9 | 
			14 | 
			-12.5062 | 
			0 | 
		
		
			| RNA1 | 
			YMR235C | 
			GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport | 
			GTPase activating protein (GAP) for Gsp1p | 
			8 | 
			27 | 
			  | 
			0 | 
		
		
			| VPS52 | 
			YDR484W | 
			Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps5... | 
			  | 
			8 | 
			12 | 
			  | 
			0 | 
		
		
			| ZUO1 | 
			YGR285C | 
			Cytosolic ribosome-associated chaperone that acts, together with Ssz1p and the S... | 
			zuotin, Z-DNA binding protein (putative) | 
			8 | 
			50 | 
			  | 
			0 | 
		
		
			| COG2 | 
			YGR120C | 
			Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog... | 
			  | 
			7 | 
			45 | 
			  | 
			NAN | 
		
		
			| YOP1 | 
			YPR028W | 
			Membrane protein that interacts with Yip1p to mediate membrane traffic; overexpr... | 
			  | 
			7 | 
			17 | 
			  | 
			0 | 
		
		
			| YIP1 | 
			YGR172C | 
			Integral membrane protein required for the biogenesis of ER-derived COPII transp... | 
			  | 
			7 | 
			28 | 
			  | 
			0.0001 | 
		
		
			| YIF1 | 
			YNL263C | 
			Integral membrane protein required for the fusion of ER-derived COPII transport ... | 
			  | 
			7 | 
			39 | 
			  | 
			0 | 
		
		
			| YIP4 | 
			YGL198W | 
			Protein that interacts with Rab GTPases; computational analysis of large-scale p... | 
			  | 
			7 | 
			26 | 
			  | 
			0 | 
		
		
			| MRS6 | 
			YOR370C | 
			Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p that is... | 
			rab geranylgeranyltransferase regulatory subunit | 
			7 | 
			22 | 
			  | 
			0 | 
		
		
			| VPS53 | 
			YJL029C | 
			Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps5... | 
			hydrophilic protein that is peripherally associated with the late Golgi and forms a stable complex with Vps52p and Vps54p | 
			7 | 
			18 | 
			  | 
			0.0001 | 
		
		
			| COG6 | 
			YNL041C | 
			Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cyt... | 
			  | 
			7 | 
			31 | 
			  | 
			NAN | 
		
		
			| YEF3 | 
			YLR249W | 
			Translational elongation factor, stimulates the binding of aminoacyl-tRNA (AA-tR... | 
			Translation elongation factor 3 (EF-3) | 
			6 | 
			94 | 
			  | 
			0 | 
		
		
			| YAF9 | 
			YNL107W | 
			Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 compl... | 
			  | 
			6 | 
			54 | 
			  | 
			0 | 
		
		
			| VPS71 | 
			YML041C | 
			Protein of unknown function, component of the Swr1p complex that incorporates Ht... | 
			  | 
			6 | 
			28 | 
			  | 
			0 | 
		
		
			| VMA6 | 
			YLR447C | 
			Subunit D of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase ... | 
			vacuolar ATPase V0 domain subunit d (36 kDa)|vacuolar H(+) ATPase 36 kDa subunit (D subunit of VO sector) | 
			6 | 
			32 | 
			  | 
			0.0001 | 
		
		
			| SGM1 | 
			YJR134C | 
			Protein of unknown function, required for wild-type growth rate on galactose and... | 
			  | 
			6 | 
			8 | 
			  | 
			0.0256 | 
		
		
			| SWC4 | 
			YGR002C | 
			Protein of unknown function, component of the Swr1p complex that incorporates Ht... | 
			  | 
			6 | 
			49 | 
			  | 
			0 | 
		
		
			| MSB3 | 
			YNL293W | 
			GTPase-activating protein for Sec4p and several other Rab GTPases, regulates exo... | 
			GTPase activating protein (GAP)  for Ypt6 | 
			6 | 
			27 | 
			  | 
			0 | 
		
		
			| ARP4 | 
			YJL081C | 
			Nuclear actin-related protein involved in chromatin remodeling, component of chr... | 
			actin related protein | 
			6 | 
			79 | 
			  | 
			0.0015 | 
		
		
			| MSB4 | 
			YOL112W | 
			GTPase-activating protein of the Ras superfamily that acts primarily on Sec4p, l... | 
			  | 
			6 | 
			11 | 
			  | 
			0 | 
		
		
			| VAM3 | 
			YOR106W | 
			Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in... | 
			syntaxin family | 
			5 | 
			40 | 
			-10.6966 | 
			0 | 
		
		
			| BDF1 | 
			YLR399C | 
			Protein involved in transcription initiation at TATA-containing promoters; assoc... | 
			  | 
			5 | 
			47 | 
			  | 
			0.0305 | 
		
		
			| YTA7 | 
			YGR270W | 
			Protein of unknown function, member of CDC48/PAS1/SEC18 family of ATPases, poten... | 
			  | 
			5 | 
			94 | 
			  | 
			0.0001 | 
		
		
			| VPS72 | 
			YDR485C | 
			Protein of unknown function, component of the Swr1p complex that incorporates Ht... | 
			  | 
			5 | 
			26 | 
			  | 
			0 | 
		
		
			| SSZ1 | 
			YHR064C | 
			Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-asso... | 
			HSP70 family | 
			5 | 
			85 | 
			  | 
			0 | 
		
		
			| ARP6 | 
			YLR085C | 
			Nuclear actin-related protein involved in chromatin remodeling, component of chr... | 
			  | 
			5 | 
			24 | 
			  | 
			0 | 
		
		
			| HTA1 | 
			YDR225W | 
			One of two nearly identical (see also HTA2) histone H2A subtypes; core histone r... | 
			histone H2A (HTA1 and HTA2 code for nearly identical proteins) | 
			5 | 
			102 | 
			  | 
			0.0232 | 
		
		
			| VPH1 | 
			YOR270C | 
			Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph... | 
			V0 sector subunit|essential for vacuolar acidification and vacuolar H-ATPase activity|vacuolar ATPase V0 domain subunit a (100 kDa)|vacuolar H-ATPase | 
			5 | 
			43 | 
			-14.6944 | 
			0.176 | 
		
		
			| SWC3 | 
			YAL011W | 
			Protein of unknown function, component of the Swr1p complex that incorporates Ht... | 
			  | 
			5 | 
			30 | 
			  | 
			0 | 
		
		
			| ISW1 | 
			YBR245C | 
			Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodelin... | 
			ATPase component of a four subunit chromatin remodeling complex | 
			4 | 
			66 | 
			  | 
			0.1698 | 
		
		
			| VMA5 | 
			YKL080W | 
			Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPa... | 
			V1 sector hydrophilic subunit C|vacuolar ATPase V1 domain subunit C (42 kDa)|vacuolar H-ATPase | 
			4 | 
			25 | 
			  | 
			0 |