CHEMGRID MOLECULE CARD
Emodin
Emodin in ChemGrid: 24 screened assays, 13 with significant responses. Explore chemical identifiers, strain activity and target evidence.
LOPAC 00595
Explore activity & SONAR
Identity and chemistry
- ChemGrid identifier
- LOPAC 00595
- Molecular formula
- C15H10O5
- InChIKey
- RHMXXJGYXNZAPX-UHFFFAOYSA-N
- Libraries
- Lopac
Stored SMILES
Cc1cc(O)c2c(=O)c3c(O)cc(O)cc3c(=O)c2c1Matched external records: PubChem 3220
Chemical identifiers and library names are reproduced from ChemGrid records. Missing values are omitted.
Measured chemical–genetic activity
24 measurements across 24 distinct library–species–strain assays; 13 assays have at least one significant response (|Z| ≥ 4, p ≤ 0.001, excluding flagged outliers).
Responses are indirect screening phenotypes. They do not establish that a strain gene is a direct molecular target. Strains and timepoints are retained as recorded; these counts are not counts of unique ORFs.
| Strain | Library | Species identifier | Z-score |
|---|---|---|---|
| whi5 | Lopac | 4932 | -17.48 |
| NOP13 | Lopac | 4932 | -12.62 |
| NOP16 | Lopac | 4932 | -11.80 |
| Gim3 | Lopac | 4932 | -11.43 |
| whi3 | Lopac | 4932 | -10.59 |
| GAS1 | Lopac | 4932 | -9.58 |
| BY4741 | Lopac | 4932 | -9.05 |
| Cln3 | Lopac | 4932 | -8.74 |
| MT2481-pdr1pdr3 | Lopac | 4932 | -7.50 |
| smi1 | Lopac | 4932 | -7.08 |
| SQS1 | Lopac | 4932 | -6.99 |
| Tep1 | Lopac | 4932 | -6.81 |
Spectrum compound-combination identifiers are excluded from this short table. The interactive profile retains the full measurements.
Recorded target evidence and yeast matches
Source annotations are shown separately from SONAR hypotheses. Evidence type and identity matching can vary; consult the linked source and interactive evidence panel.
| Target | Source | Yeast ORF / orthologue |
|---|---|---|
| CSNK2A1 · Casein kinase II subunit alpha | ChEMBL | CKA1 YIL035C (ortholog_many2many); CKA2 YOR061W (ortholog_many2many) |
| CSNK2B · Casein kinase II | ChEMBL | No stored yeast mapping |
| CSNK2B · Casein kinase II alpha/beta | ChEMBL | No stored yeast mapping |
| ESR1 · Estrogen receptor | ChEMBL | No stored yeast mapping |
| ESR2 · Estrogen receptor beta | ChEMBL | No stored yeast mapping |
| HDAC6 · Protein deacetylase HDAC6 | ChEMBL | HDA1 YNL021W (ortholog_one2one) |
| HSD17B10 · 3-hydroxyacyl-CoA dehydrogenase type-2 | ChEMBL | No stored yeast mapping |
| LMNA · Prelamin-A/C | ChEMBL | No stored yeast mapping |
| PSMB1 · Proteasome component C5 | ChEMBL | PRE7 YBL041W (ortholog_one2one) |
| PSMB5 · Proteasome Macropain subunit MB1 | ChEMBL | PRE3 YJL001W (ortholog_one2many) |
| p56lck TK | ChemGrid bioactivity_info | No stored yeast mapping |
Structural activity predictions and SONAR
Stored structural activity predictions are available in the interactive profile, with assay-specific cutoffs and applicability-domain assessments.
SONAR ranks candidate targets through genetic and physical interaction evidence. Structural SONAR uses predicted strain responses; measured SONAR uses experimental responses. These are experimental hypotheses, not confirmed binding targets. Outside-domain predictions are treated as unknown.
Open the complete Emodin research profile →Sources and provenance
Screening measurements: ChemGrid chemical-genetic datasets. Wildenhain et al., Cell Systems (2015). Target annotations: sources named in the evidence table. Structure and library metadata: stored ChemGrid catalogue records.
Card snapshot: 2026-11-02. Linked interactive views may contain newer data.